2011-2017

  1. Renshaw, M. A., Nemeth, R. S., and Gold, J. R. (2011) Isolation and characterization of microsatellite markers from yellowfin grouper, Mycteroperca venenosa. Conservation Genetics Resources 3:341-344. PDF

  2. Gold, J. R., Voelker, G., and Renshaw, M. A. (2011) Phylogenetic relationships of tropical western Atlantic snappers in Subfamily Lutjaninae (Lutjanidae; Perciformes) inferred from mitochondrial DNA sequences. Biological Journal of the Linnaean Society 102: 915-929. PDF

  3. Renshaw, M. A., Portnoy, D. S., Vidal, R., and Gold, J. R. (2011) Isolation and characterization of microsatellite markers in the southern hake, Merluccius australis. Conservation Genetics Resources 3(1):91–94. PDF

  4. Vega, R. R., Neill, W. H., Gold, J. R., and Ray, M. S. (2011) Enhancement of Texas Sciaenids (red drum and spotted seatrout). In: Interactions of fisheries and fishing communities related to aquaculture (R. Stickney, R. Iwamoto, and M. Rust, eds.). Proceedings of the Thirty-Eight U.S.-Japan Aquaculture Panel Symposium, Corpus Christi, Texas, October 26-27, 2009. U.S. Dept. Commerce, NOAA Tech. Memo. NMFS-F/SPO-113, 85-92 p. PDF

  5. Gold, J. R., Saillant, E., Cummings, N. J., and Renshaw, M. A. (2011) Genetic divergence and effective size among lane snapper (Lutjanus synagris) in U.S. waters of the western Atlantic Ocean. North American Journal of Fisheries Management 31: 209-223. PDF

  6. Carson, E. W. Saillant, E., Renshaw, M. A., Cummings, N. J., and Gold, J. R. (2011) Population structure and long-term connectivity and effective size of mutton snapper (Lutjanus analis) in the northern Caribbean Sea and the Florida Keys. Fishery Bulletin US 109: 416-428. PDF

  7. Portnoy, D. S., Hollenbeck, C. M., Renshaw, M. A., and Gold, J. R. (2011) Microsatellite panels for gene localization in red drum, Sciaenops ocellatus. Aquaculture 319: 505–508. PDF

  8. Giresi, M., Renshaw, M. A., Portnoy, D. S., and Gold, J. R. (2012) Isolation and characterization of microsatellites for the dusky smoothhound shark, Mustelus canis. Conservation Genetics Resources. 4: 101-104. PDF

  9. Giresi M, Renshaw MA, Portnoy DS, Gold JR (2012) Isolation and characterization of microsatellite markers for the blacknose shark, Carcharhinus acronotus.  Conservation Genetics Resources 4:141-145.  PDF

  10. Renshaw, M. A., Hollenbeck, C. M., and Gold, J. R. (2012). Isolation of microsatellite markers from red drum, Sciaenops ocellatus, and characterization in red drum and spotted seatrout, Cynoscion nebulosus. Molecular Ecology Resources 12: 570-572. PDF

  11. Saillant, E., Renshaw, M. A., Cummings, N. J., and Gold, J. R. (2012) Conservation genetics and management of yellowtail snapper (Ocyurus chrysurus) in the U.S. Caribbean and South Florida. Fisheries Management and Ecology 19: 301-312. PDF

  12. Portnoy, D.S., and Gold, J. R. (2012) Evidence of multiple vicariance in a marine suture-zone in the Gulf of Mexico. Journal of Biogeography 39: 1499-1507. PDF

  13. Renshaw, M. A., Buentello, A., and Gold, J. R. (2012) Characterization of greater amberjack (Seriola dumerili) microsatellite markers in lesser amberjack, yellowtail amberjack, almaco jack, and banded rudderfish. North American Journal of Aquaculture 74: 522–529. PDF

  14. Vidal, R. R., Carson, E. A., and Gold, J. R. (2012). Population structure in Chilean hake (Merluccius gayi) along the western (Pacific) coast of South America as revealed by mitochondrial DNA sequences. Journal of Fish Biology 81: 1763–1772. PDF

  15. Giresi, M., Renshaw, M. A., Portnoy, D. S., Gold, J. R. (2012) Development and characterization of microsatellite markers for the finetooth shark, Carcharhinus isodon. Conservation Genetics Resources 4: 637-643. PDF

  16. Renshaw, M. A., Nemeth, R. S., and Gold, J. R. (2012) Isolation of microsatellite markers from tiger grouper (Mycteroperca tigris) and characterization in yellowfin grouper (Mycteroperca venenosa), coney (Cephalopholus fulva), and red hind (Epinephelus guttatus). Conservation Genetics Resources 4: 1049-1054. PDF

  17. Hollenbeck, C. M., Portnoy, D. A., and Gold, J. R. (2012) Use of comparative genomics to develop EST-SSRs for red drum (Sciaenops ocellatus). Marine Biotechnology 14: 672-680. PDF

  18. Gold, J. R., Giresi, M. M., Renshaw, M. A., and Gwo, J.-C. (2013) Population genetic comparisons among cobia (Rachycentron canadum) from the northern Gulf of Mexico, U.S. western Atlantic, and Southeast Asia. Journal of North American Aquaculture 74:522–529. PDF

  19. Portnoy, D. S., Hollenbeck, C. M., Renshaw, M. A., Cummings, N. J., and Gold, J. R. (2013) Does mating behavior affect connectivity in marine fishes? Comparative population genetics of two protogynous groupers (Family Serranidae). Molecular Ecology 22: 301-313. PDF

  20. Heinrichs, D. W., Renshaw, M. A., Gold, J. R., and Campbell, L. (2013) Genetic diversity among clonal isolates of Karenia brevis as measured with microsatellite markers. Harmful Algae 21-22:30–35. PDF

  21. Hanna, A. H., Conway, K. W., Carson, E. W., Garrett, G. P., and Gold, J. R. (2013) Conservation genetics of an undescribed species of Dionda (Teleostei: Cyprinidae) in the Rio Grande drainage in western Texas.  Southwestern Naturalist 58(1):35–40. PDF

  22. Renshaw, M. A., Blandon, I. R., and Gold, J. R. (2013) Isolation and characterization of microsatellite markers in southern flounder, Paralichthys lethostigma. Conservation Genetics Resources 5:35-38. PDF

  23. Portnoy, D. S., and Gold, J. R. (2013) Finding geographic population structure in marine fish species with high gene flow. Gulf and Caribbean Fisheries Institute 65: 384-389. PDF

  24. Giresi, M. M., Grubbs, R. D., Portnoy, D. S., and Gold, J. R. (2013) A morphological key to distinguish among smoothhound sharks (Genus Mustelus) in the Gulf of Mexico. Gulf and Caribbean Fisheries Institute 65: 143-146. PDF

  25. Heinrichs, D. W., Renshaw, M. A., Gold, J. R., and Campbell, L. (2013) Population genetic structure of the toxic dinoflagellate Karenia brevis from the Gulf of Mexico. Journal of Plankton Research 35(2):427–432. PDF

  26. Carson, E. W., Bumguardner, B. W., Fisher, M., Saillant, E., and Gold, J. R. (2014) Spatial and temporal variation in recovery of hatchery-released red drum (Sciaenops ocellatus) in Texas bays and estuaries. Fisheries Research 151: 191-198. PDF

  27. Portnoy, D. S., Hollenbeck, C. M., Vidal, R. R., and Gold, J. R. (2014) A comparison of neutral and immune genetic variation in Atlantic salmon, Salmo salar L., exposed to the ISA virus in Chilean aquaculture facilities. PLoS ONE 9(6):e99358. PDF

  28. Puritz, J. B., Hollenbeck, C. M., and Gold, J. R. (2014) dDocent: a RADseq, variant-calling pipeline designed for population genomics of non-model organisms. PeerJ 2:e43. PDF

  29. Portnoy, D. S., Hollenbeck, C. M., Johnston, J. S., Casman, H. M., and Gold, J. R. (2014) Parthenogenesis in a reef whitetip shark, Triaenodon obesus, involves a reduction in ploidy. Journal of Fish Biology 85: 502-508. PDF

  30. Carson, E. W., Hanna, A. H., Garrett, G. P., Edwards, R.J., and Gold, J. R.  (2014)  Conservation genetics of cyprinid fishes in the upper Nueces River basin in central Texas.  Southwestern Naturalist 59: 1-8. PDF

  31. Puritz, J. B., Renshaw, M. A., Vera, R. R., Abrego, D., and Gold, J. R. (2014) Reproductive variance of brood dams and sires used in restoration enhancement of spotted seatrout (Cynoscion nebulosus) in Texas bays and estuaries. North American Journal of Aquaculture 76: 407-414. PDF

  32. Portnoy, D. S., Hollenbeck, C. M., Belcher, C. N., Driggers, W. B. III, Frasier, B. S., Gelsleichter. J., Grubbs, R. D., and Gold, J. R. (2014) Contemporary population structure and post-glacial genetic demography in a migratory marine species, the blacknose shark, Carcharhinus acronotus. Molecular Ecology 23: 5480–5495. PDF

  33. Hollenbeck, C. M., Portnoy, D. S., and Gold J. R. (2015) A genetic linkage map of red drum (Sciaenops ocellatus) and comparison of chromosomal syntenies with four other fish species. Aquaculture 435: 265-274. PDF

  34. Hanna, A. H., Carson, E. W., Garrett, G. P., and Gold. J. R. (2015) Conservation genetics of six speceis of genus Dionda (Cyprinidae) in the southwestern United States. Monographs of the Western North American Naturalist 8:1–25. PDF

  35. Hollenbeck, C. M., Portnoy, D. S, Saillant, E., and Gold, J. R. (2015) Population structure of red snapper (Lutjanus campechanus) in U.S. waters of the western Atlantic Ocean and the northeastern Gulf of Mexico. Fisheries Research 172: 17-25. PDF

  36. Gold, J. R., Willis, S. C., Renshaw, M. A., Buentello, A., Walker, H. J., Puritz, J. B., Hollenbeck, C. M., and Voelker, G. (2015). Phylogenetic relationships of tropical eastern Pacific snappers (Lutjanidae) inferred from mitochondrial DNA sequences. Systematics and Biodiversity. PDF

  37. Giresi, M. M., Grubbs, R. D., Portnoy, D. S., Driggers III, W. B, Jones, L., and Gold, J. R. (2015). Identification and distribution of morphologically conserved smoothhound sharks (Genus Mustelus) in the Northern Gulf of Mexico. Transactions of the American Fisheries Society. In press. PDF

  38. Portnoy, D. S., Puritz, J. B., Hollenbeck, C. M., Gelsleichter, J., Chapman, D., and Gold, J. R. (2015).  Selection and sex-biased dispersal in a coastal shark: the influence of philopatry on adaptive variation.  Molecular Ecology. PDF

  39. Hollenbeck, C.M., Portnoy, D.S., Wetzel, D., Sherwood, T.A., Samollow, P.B., and Gold, J.R. (2016).  Linkage mapping and comparative genomics of red drum (Sciaenops ocellatus) using next-generation sequencing. G3: Genes, Genomes, Genetics.  PDF

  40. Portnoy, D. S., Willis, S. C., Hunt, E., Swift, D. G., Gold, J. R., and Conway, K. W.  (2017).  Molecular phylogenetics of New World searobins (Triglidae; Prionotinae).  Molecular Phylogenetics and Evolution 107 (2017) 382–387. PDF

  41. Willis, S. C., Hollenbeck, C. M., Puritz, J. B., Gold, J. R., and Portnoy, D. S. (2017).  Haplotyping RAD loci: an efficient method to filter paralogs and account for physical linkage.  Molecular Ecology Resources.  DOI: 10.1111/1755-0998.12647 PDF

  42. Barker, A. M., Frazier, B. S., Bethea, D. M., Gold, J. R., and Portnoy, D. S. (2017) Identification of young-of-the-year great hammerhead shark Sphyrna mokarran in northern Florida and South Carolina.  Journal of Fish Biology. DOI:10.1111/jfb.13356  PDF

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